I would guess it would, MBAM seems to run quite smoothly with most security software. Why don't you ask on the Malwarebytes forum? They will give you an answer pretty quick.
The easiest way to find out is to install both and test them. The reason I say that, is that what works well on one computer, may not work so well on another, so the best way is to see what works on your computer.
Salutations, Malwarebytes run like a champ!!! Also, you can Emsisoft Emergency Kit (EEK) from USB Stick. With no problems! Set Drweb Security Space10 to paranoid mode. Now let see any malware get through!