Strategies to Prevent DNA Contamination

Discussion in 'privacy general' started by mirimir, Mar 3, 2015.

  1. mirimir

    mirimir Registered Member

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    Yes, I was misremembering. SDS does denature DNase. The detergent for lysing with DNase was the nonionic surfactant Triton X-100.
    Right, leaving hair, fluids, etc would be be unwise.
     
  2. 142395

    142395 Guest

    It seems you also have to mix high concentration NaCl to break chromosome as Triton X-100 is not enough for that.
     
  3. noone_particular

    noone_particular Registered Member

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    Plain old salt? Is it really that simple?
     
  4. mirimir

    mirimir Registered Member

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    Yes, high salt does disrupt chromosomes. But this was prep for SDS gel electrophoresis in polyacrylamine, so high salt would have been problematic. As I recall, we used urea. And by the way, some hand cremes use urea for moisture retention. So Triton X-100 + urea + DNase would probably be OK.
    Any nonreactive salt at high concentration will work. Guanidine hydrochloride is a common choice.
     
  5. deBoetie

    deBoetie Registered Member

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    No no no no no. You of all people should be aware of the need to use different salts with your hashes. Depending on your persona at the time.
     
  6. mirimir

    mirimir Registered Member

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    Hey, chemistry was my first love :)
     
  7. 142395

    142395 Guest

    Yup, salt can pull DNA apart from histones.
    Okay, urea is nice idea as you stated, tho ofc Trinton X-100 (rather, all surfactant―so probably we don't have option for this unless something can pass DNase through membrane w/out breaking it, which will be hard for dead cell) is not good for skin.
    In my case, physics―tho in some area such as nano-science, there's no clear boundary btwn 2.
     
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